Thanks guys, yup I used lex's guide which was pretty awesome.
I weighed up the idea of removing the exhaust to get the alternator cover and rolling the bike along my garage floor and checking. I figured the time I saved removing the exhaust (since there's a bead of silastic in all the joints) would be time spent guessing TDC.
I'll have to search the forum to see if that tab at the bottom of the alternator cover is necessary, if not it's removal might make the whole job quicker.
Thanks for the feedback, Alex's answers to some of my questions has certainly eased my mind.
Good stuff, thanks guys.